Bioinformatics
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Digital Cell Sorter (DCS): a cell type identification, anomaly detection, and Hopfield landscapes toolkit for single-cell transcriptomics
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MACREL : antimicrobial peptide screening in genomes and metagenomes
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BiSCoT: Improving large eukaryotic genome assemblies with optical maps
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Bioshake: a Haskell EDSL for bioinformatics pipelines
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ProminTools: Shedding light on proteins of unknown function in biomineralization with user friendly tools illustrated using mollusc shell matrix protein sequences
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A flexible pipeline combining clustering and correction tools for prokaryotic and eukaryotic metabarcoding
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Fuzzysplit: Demultiplexing and Trimming Sequenced DNA With a Declarative Language
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DiscoSnp-RAD: de novo detection of small variants for population genomics
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Structural, functional and molecular dynamics analysis of cathepsin B gene SNPs associated with tropical calcific pancreatitis, a rare disease of tropics
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Algorithms for efficiently collapsing reads with Unique Molecular Identifiers
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