Bioinformatics
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Towards Universal Cell Embeddings: Integrating Single-cell RNA-seq Datasets across Species with SATURN
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IAMSAM : Image-based Analysis of Molecular signatures using the Segment-Anything Model
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CellWalker: A user-friendly and modular computational pipeline for morphological analysis of microscopy images
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LimoRhyde2: genomic analysis of biological rhythms based on effect sizes
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Telomere-to-Telomere Assembly Improves Host Reads Removal in Metagenomic High-Throughput Sequencing of Human Samples
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An accessible infrastructure for artificial intelligence using a docker-based Jupyterlab in Galaxy
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DivBrowse – interactive visualization and exploratory data analysis of variant call matrices
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The Regulatory Mendelian Mutation score for GRCh38
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The GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
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Contamination detection and microbiome exploration with GRIMER
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