Bioinformatics
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Lilikoi V2.0: a deep-learning enabled, personalized pathway-based R package for diagnosis and prognosis predictions using metabolomics data
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Understanding the impact of preprocessing pipelines on neuroimaging cortical surface analyses
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Streamlining Data-Intensive Biology With Workflow Systems
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BiG-SLiCE: A Highly Scalable Tool Maps the Diversity of 1.2 Million Biosynthetic Gene Clusters
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Tool recommender system in Galaxy using deep learning
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SoupX removes ambient RNA contamination from droplet based single-cell RNA sequencing data
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DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data
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iGenomics: Comprehensive DNA Sequence Analysis on your Smartphone
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GigaSOM.jl: High-performance clustering and visualization of huge cytometry datasets
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Correcting for experiment-specific variability in expression compendia can remove underlying signals
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