Bioinformatics
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Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data
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Efficient and accurate detection of splice junctions from RNAseq with Portcullis
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Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes
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Ximmer: A System for Improving Accuracy and Consistency of CNV Calling from Exome Data
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Monitoring changes in the Gene Ontology and their impact on genomic data analysis
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PhenoSpD: an integrated toolkit for phenotypic correlation estimation and multiple testing correction using GWAS summary statistics
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ANNOgesic: A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genomes
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Clinker: visualising fusion genes detected in RNA-seq data
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SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution
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Clustering trees: a visualisation for evaluating clusterings at multiple resolutions
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