Sister chromatid separation determines the proliferative characteristics upon whole-genome duplication through homologous chromosome rearrangement

Whole-genome duplication (WGD) of diploid cells triggers various cell fates, such as cell death, cell cycle arrest, and proliferation with chromosome instability, contributing to broad bioprocesses, including differentiation, tumorigenesis, or aging. However, factors determining the post-WGD cell fates remain largely unknown. In this study, we found that cytokinesis failure (CF) and mitotic slippage (MS), two major routes of WGD induction, differentially affected post-WGD viability and proliferation in human cells. Quantitative live imaging revealed poorer survivability of cells upon multipolar chromosome segregation at the first mitosis after MS than CF. Chromosome-specific labeling showed that the lack of sister chromatid separation upon MS caused more skewed homologous chromosome distribution than CF. The skewed homologue distribution frequently led to physical isolation (> 10 μm) of the centrosomes from all homologous centromeres, hindering these centrosomes from capturing any of these homologues. The difference in the frequency of this nullisomic chromosome segregation between MS and CF well explained their difference in the viability of the subsequent daughter cells. Moreover, artificial separation of sister chromatids upon MS improved the evenness of homologue distribution, suppressed nullisomic homologue segregation in the following mitosis, and significantly restored the viability of their daughter cells. These results demonstrate the geometric arrangement of homologous chromosomes, defined by the presence or absence of sister chromatid separation upon WGD, as a key factor determining the proliferative characteristics of subsequent progenies. Our findings would provide a clue to understanding the route-dependent outcomes of WGD in cell fate determination in different bioprocesses.