A bioinformatics approach to the design of minimal biomimetic metal-binding peptides

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Abstract

Nature-inspired or biomimetic catalyst aims to reach the high catalytic performance and selectivity of natural enzymes while possessing the chemical stability and processability of synthetic catalysts. A promising strategy for designing biomimetic catalysts holds on mimicking the structure of the enzyme active site. This can either entail complicated total synthesis of a synthetic catalyst or design of peptide sequences, able to self-assemble in the presence of metal ions, thus forming metallo-peptide complexes that mimic the active sites of natural enzymes. Using a bioinformatics approach, we designed a minimal peptide made up of eight amino acids (H4pep) to act as a functional mimic of the trinuclear Cu site of the laccase enzyme. Cu(II) binding to H4pep results in the formation of a Cu2+(H4pep)2 complex with a β-sheet secondary structure, able to reduce O2. Our study demonstrates the viability and potential of using short peptides to mimic the minimal functional site of natural enzymes. Teaser A minimal peptide, designed via bioinformatics, effectively mimics the trinuclear copper site in laccase for O₂ reduction. MAIN TEXT

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