Bioinformatics
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Neuroendocrinology of the lung revealed by single cell RNA sequencing
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Taxonium, a web-based tool for exploring large phylogenetic trees
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A highly contiguous, scaffold-level nuclear genome assembly for the Fever tree (Cinchona pubescens Vahl) as a novel resource for research in the Rubiaceae
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svaRetro and svaNUMT: Modular packages for annotation of retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data
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T cell receptor convergence is an indicator of antigen-specific T cell response in cancer immunotherapies
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A novel in silico method employs chemical and protein similarity algorithms to accurately identify chemical transformations in the human gut microbiome
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The Effects of Nonlinear Signal on Expression-Based Prediction Performance
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Generative power of a protein language model trained on multiple sequence alignments
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Tourmaline: a containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake
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ProteInfer: deep networks for protein functional inference
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