Bioinformatics
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ProtSpace: a tool for visualizing protein space
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Knowledge Graph-based Thought: a knowledge graph enhanced LLMs framework for pan-cancer question answering
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Drug combination prediction for cancer treatment using disease-specific drug response profiles and single-cell transcriptional signatures
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Multi-tissue network analysis reveals the effect of JNK inhibition on dietary sucrose-induced metabolic dysfunction in rats
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InterPLM: Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders
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AACDB: Antigen-Antibody Complex Database — a Comprehensive Database Unlocking Insights into Interaction Interface
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IMMClock reveals immune aging and T cell function at single-cell resolution
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PlasGO: enhancing GO-based function prediction for plasmid-encoded proteins based on genetic structure
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Benchmarking the coding strategies of non-coding mutations on sequence-based downstream tasks with machine learning
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The Effects of Nonlinear Signal on Expression-Based Prediction Performance
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