Bioinformatics
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stMMR: accurate and robust spatial domain identification from spatially resolved transcriptomics with multi-modal feature representation
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CAT Bridge: An Efficient Toolkit for Gene-Metabolite Association Mining from Multi-Omics Data
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Pan-tissue Transcriptome Analysis Reveals Sex-dimorphic Human Aging
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Metagenome-assembled genomes of Estonian Microbiome cohort reveal novel species and their links with prevalent diseases
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ConvCGP: A Convolutional Neural Network to Predict Genotypic Values of Rice Traits from Compressed Genome-Wide Polymorphisms
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A Large-Scale Foundation Model for RNA Function and Structure Prediction
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Miniature: Unsupervised glimpses into multiplexed tissue imaging datasets as thumbnails for data portals
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Single-Cell and Spatial Transcriptomic Analyses Reveals the Dynamic Transcript Profiles of Myocardial Lymphangiogenesis post Myocardial Infarction
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Statistical analysis supports pervasive RNA subcellular localization and alternative 3’ UTR regulation
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Discovering genotype-phenotype relationships with machine learning and the Visual Physiology Opsin Database (VPOD)
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