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Genomics

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  • Single-cell transcriptomics of X-ray irradiated Drosophila wing discs reveals heterogeneity related to cell-cycle status and cell location

    This article's authors
    1. Joyner Cruz
    2. Willam Y. Sun
    3. Alexandra Verbeke
    4. Iswar K. Hariharan
    This article has 10 evaluations Latest evaluation on Jan 15, 2026 Published on Nov 13, 2025
  • Haplotype-resolved chromosome-level genome assemblies of four Diamesa species reveal the genetic basis of cold tolerance and high-altitude adaptations in arctic chironomids

    This article's authors
    1. Sarah L.F. Martin
    2. Renato La Torre
    3. Bram Danneels
    4. Ave Tooming-Klunderud
    5. Morten Skage
    6. Spyridon Kollias
    7. Ole Kristian Tørresen
    8. Mohsen Falahati Anbaran
    9. Elisabeth Stur
    10. Kjetill S. Jakobsen
    11. Michael D. Martin
    12. Torbjørn Ekrem
    This article has 2 evaluations Latest evaluation on Jan 5, 2026 Published on Aug 1, 2025
  • Raman2RNA: Live-cell label-free prediction of single-cell RNA expression profiles by Raman microscopy

    This article's authors
    1. Koseki J. Kobayashi-Kirschvink
    2. Shreya Gaddam
    3. Taylor James-Sorenson
    4. Emanuelle Grody
    5. Johain R. Ounadjela
    6. Baoliang Ge
    7. Ke Zhang
    8. Jeon Woong Kang
    9. Ramnik Xavier
    10. Peter T. C. So
    11. Tommaso Biancalani
    12. Jian Shu
    13. Aviv Regev
    This article has 4 evaluations Latest evaluation on Jan 2, 2026 Published on May 23, 2022
  • Integrating bulk and single cell RNA-seq refines transcriptomic profiles of individual C. elegans neurons

    This article's authors
    1. Alec Barrett
    2. Erdem Varol
    3. Alexis Weinreb
    4. Seth R. Taylor
    5. Rebecca McWhirter
    6. Cyril Cros
    7. Berta Vidal
    8. Manasa Basavaraju
    9. Abigail Poff
    10. John A. Tipps
    11. Maryam Majeed
    12. Chen Wang
    13. Emily A. Bayer
    14. Molly Reilly
    15. Eviatar Yemini
    16. HaoSheng Sun
    17. Oliver Hobert
    18. David M. Miller
    19. Marc Hammarlund
    This article has 9 evaluations Latest evaluation on Dec 29, 2025 Published on Oct 20, 2025
  • 10,239 whole genomes with multi-omic and clinical health information as the Korean population multi-omic reference dataset

    This article's authors
    1. Kyungwhan An
    2. Sungwon Jeon
    3. Yoonsung Kwon
    4. Changhan Yoon
    5. Yookyung Choi
    6. Yeonsu Jeon
    7. Hyoung-Jin Choi
    8. Jihun Bhak
    9. Dong-Hyun Shin
    10. Hyomin Lee
    11. Yeo Jin Kim
    12. Eun-Seok Shin
    13. Hyojung Ryu
    14. Asta Blazyte
    15. Sangsoo Park
    16. Juok Cho
    17. Dan Bolser
    18. Jongbum Jeon
    19. Soobok Joe
    20. Jin Ok Yang
    21. Jong-Hwan Kim
    22. Byoung-Chul Kim
    23. Jungeun Kim
    24. Neung-Hwa Park
    25. Siwoo Lee
    26. Hee-jeong Jin
    27. Younghwa Baek
    28. Dooyoung Jung
    29. Yunsung Cho
    30. Yong Min Ahn
    31. Hyung-Tae Jung
    32. Byungjoo Ham
    33. Yoon Young Choi
    34. Seung Ah Choi
    35. Seung-Ki Kim
    36. Ji Hoon Phi
    37. Heon Yung Gee
    38. Borah Kim
    39. Woojae Myung
    40. Chong Kun Cheon
    41. Dong Uk Kim
    42. Gang-Nam Jin
    43. Hojune Lee
    44. Kyun Shik Chae
    45. Chang Geun Kim
    46. BongHee Lee
    47. Jaesuk Lee
    48. Semin Lee
    49. George Church
    50. Haeyoung Jeong
    51. Jong Bhak
    This article has 3 evaluations Latest evaluation on Dec 28, 2025 Published on Nov 17, 2025
  • Single-cell co-mapping reveals relationship between chromatin state and gene expression in early zebrafish development

    This article's authors
    1. Vivek Bhardwaj
    2. Alberto Griffa
    3. Helena Viñas Gaza
    4. Peter Zeller
    5. Alexander van Oudenaarden
    This article has 8 evaluations Latest evaluation on Dec 20, 2025 Published on Dec 22, 2025
  • Nanopore genome skimming with Illumina polishing yields highly accurate mitogenome sequences: a case study of Niphargus amphipods

    This article's authors
    1. Alice Salussolia
    2. Ninon Lecoquierre
    3. Fabio Stoch
    4. Jean-François Flot
    This article has 1 evaluations Latest evaluation on Dec 19, 2025 Published on Dec 4, 2025
  • Breaking Through Biology's Data Wall: Expanding the Known Tree of Life by Over 10x using a Global Biodiscovery Pipeline

    This article's authors
    1. Oliver Vince
    2. Phoebe Oldach
    3. Valerio Pereno
    4. Marcus H Y Leung
    5. Carla Greco
    6. Gus Minto-Cowcher
    7. Saif Ur-Rehman
    8. Keith Y K Kam
    9. William Chow
    10. Emma Bolton
    11. Bupe R Mwambingu
    12. Nadine L Greenhalgh
    13. Ineke E Knot
    14. Leif Christoffersen
    15. Marlon Clark
    16. Robert Pecoraro
    17. Aaron W Kollasch
    18. Tanggis Bohnuud
    19. Matthew Bakalar
    20. Philipp Lorenz
    21. Glen Gowers
    This article has 5 evaluations Latest evaluation on Dec 15, 2025 Published on Jun 14, 2025
  • Mechanistic dissection of GRHL2 and PR transcriptional co-regulation in breast cells

    This article's authors
    1. M.T. Aarts
    2. A. Nordin
    3. C. Cantù
    4. A.L. van Boxtel
    5. R. van Amerongen
    This article has 4 evaluations Latest evaluation on Dec 8, 2025 Published on Sep 5, 2025
  • Multimodal single-cell analyses reveal distinct fusion-regulated transcriptional programs in Ewing sarcoma

    This article's authors
    1. Olivia G. Waltner
    2. April A. Apfelbaum
    3. Emma D. Wrenn
    4. Shruti S. Bhise
    5. Sami B. Kanaan
    6. Rula Green Gladden
    7. Mark A. Mendoza
    8. Roger Volden
    9. Zev Kronenberg
    10. Anand Patel
    11. Michael Dyer
    12. Jay F. Sarthy
    13. Elizabeth R. Lawlor
    14. Scott N. Furlan
    This article has 3 evaluations Latest evaluation on Dec 5, 2025 Published on Sep 3, 2025
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